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ptdTomato-N1

For research use only. Not intended for any clinical use.
Cat.No.
VET1300
Host Cell
mammalian cells, Escherichia coli
Promoter
CMV
Resistance
Kanamycin
Vector Size
5443 bp
Vector Type
Expression Vector

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ptdTomato-N1 is a mammalian expression vector designed to express target proteins fused to the N-terminus of tdTomato. td tomato is a member of the fruit fluorescent protein family derived from Discosoma sp. Red fluorescent protein, DsRed. Since tomato proteins have a tendency to dimerize, this vector was designed to link together two copies of the tomato coding region to allow intramolecular dimerization. Therefore, each tdTomato RNA transcript encodes a tandem dimer of Tomato protein (excitation and emission maxima equal to 554 nm and 581 nm, respectively). Expression of td Tomato as a tandem dimer prevents the fusion protein of interest from being forced to form a dimer complex. Fusions that retain the fluorescent properties of tdTomato can be monitored by flow cytometry and localized by fluorescence microscopy. The multiple cloning site (MCS) in ptdTomato-N1 is located upstream of the tdTomato coding sequence. The Kozak consensus sequence located between the MCS and tdTomato coding sequences increases the translation efficiency of unfused tdTomato proteins in eukaryotic cells. The SV40 polyadenylation signal downstream of the tdTomato coding sequence directs the correct processing of the 3' end of the tdTomato (or fusion gene) mRNA.

To determine the effects of different radiation qualities on cell proliferation and biological depth dose distribution after heavy ion exposure, stable human cell lines expressing novel fluorescent proteins were established and characterized. Human embryonic kidney (HEK/293) cells were stably transfected with a plasmid encoding tdTomato under the control of a constitutively active cytomegalovirus (CMV) promoter (ptdTomato-N1). The stably transfected cell line was named HEK-ptdTomato-N1 8. The cytotoxicity biosensor was tested by exposure to ionizing radiation (X-rays and accelerated heavy ions). As biological endpoints, the researchers studied proliferation kinetics and cell density 100 hours after irradiation as reflected by constitutive expression of tdTomato. Both decreased in a dose-dependent manner after radiation exposure. Finally, this cell line was used to biologically weight heavy ions with different linear energy transfers (LETs) as spatially correlated radiative masses. The relative bioeffectiveness of accelerated heavy ions in reducing cell proliferation peaks at a LET of 91 keV/μm. The results of this study demonstrate that the HEK-ptdTomato-N1 reporter cell line can be used as a rapid and reliable biosensor system for detecting cytotoxic damage induced by ionizing radiation.

Schematic diagram of ptdTomato-N1 vector and tdTomato expression in HEK/293 cells after transfection with the vector.Figure 1. Schematic diagram of ptdTomato-N1 vector and tdTomato expression in HEK/293 cells after transfection with the vector. Plasmid ptdTomato-N1 (A) was stably transfected into human embryonic kidney cells (HEK-ptdTomato-N1). After stable transfection, single colonies were picked and the cells were propagated in tissue culture flasks. Photographs were taken with a microscope camera Mrc 5 attached to a fluorescence microscope (B: phase contrast, C: red fluorescence, filter combination 540/590). (Chishti A A, et al., 2015)

Growth kinetics of HEK-ptdTomato-N1 in comparison to non-transfected HEK/293.Figure 2. Growth kinetics of HEK-ptdTomato-N1 in comparison to non-transfected HEK/293. (Chishti A A, et al., 2015)

The ptdTomato-N1 vector has found various applications in molecular biology and cell imaging studies. Here are some examples: Fluorescent protein tagging: The ptdTomato-N1 vector is commonly used for the introduction of the ptdTomato fluorescent protein into target proteins. This allows for visualization and tracking of the tagged protein within cells or tissues. Cell tracking and lineage tracing: By introducing the ptdTomato-N1 vector into cells, it is possible to label and track the cells over time. This is especially useful in developmental biology studies, where researchers can track the fate of specific cell lineages. Protein-protein interaction studies: The ptdTomato-N1 vector can be used to create fusion proteins, where ptdTomato is fused to a target protein of interest. This enables the visualization and analysis of protein-protein interactions within living cells. Gene expression analysis: The ptdTomato-N1 vector can be used to study gene expression patterns by tagging specific promoter regions with ptdTomato. This allows researchers to visualize and quantify gene expression levels in real-time. Live-cell imaging: Due to its bright red fluorescence, the ptdTomato-N1 vector is commonly used in live-cell imaging studies. Researchers can track cellular processes and dynamics with high resolution and sensitivity using this vector. Overall, the ptdTomato-N1 vector serves as a versatile tool in various molecular biology and cell imaging applications, allowing researchers to visualize and manipulate proteins and genes within living cells with high precision.
Customer Q&As
What is ptdTomato-N1?

A: ptdTomato-N1 is a mammalian expression vector containing a tandem sequence of the dimeric red fluorescent protein, Tomato.

What is the purpose of the MCS at the 5' end of the coding sequence?

A: The MCS allows insertion of a gene of interest to express it as an N-terminal fusion with tdTomato.

What is the purpose of the neomycin resistance cassette (Neor) in ptdTomato-N1?

A: The neomycin resistance cassette allows for G418 selection of stably transfected eukaryotic cells.

What does the neomycin resistance cassette of ptdTomato-N1 consist of?

A: The neomycin resistance cassette consists of the SV40 early promoter, the Tn5 neomycin/kanamycin resistance gene, and polyadenylation signals from the herpes simplex virus thymidine kinase (HSV TK) gene.

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Customer Reviews
Visualization

The ptdTomato-N1 vector incorporates ptdTomato into the coding sequence, enabling the visualization and tracking of gene expression and protein localization in living cells with high sensitivity and specificity.

Germany

03/08/2020

High transfection efficiency

The ptdTomato-N1 vector provides a high transfection efficiency, ensuring successful gene delivery into target cells.

Germany

03/10/2021

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