TMEM165 is associated with a rare human genetic disease named TMEM165-CDG (congenital disorder of glycosylation). It is localized to the Golgi apparatus, is highly conserved during evolution, and belongs to uncharacterized protein family 0016 (UPF0016). The use of homologous TMEM165 knockout HEK293 cells was crucial to reveal the role of TMEM165 in Golgi manganese homeostasis. Manganese is a major cofactor for many glycosylation enzymes. Severe Golgi glycosylation defects were observed in TMEM165 knockout human embryonic kidney (KO HEK) 293 cells that could be rescued by exogenous manganese supplementation. Interestingly, here the researchers demonstrate that the observed Golgi glycosylation defects are critically dependent on fetal bovine serum, especially its manganese levels. These results also suggest that iron and/or galactose can modulate the glycosylation defects observed in TMEM165 knockout HEK293 cells.
Previous studies have shown that supplementation with galactose can suppress some of the glycosylation defects of TMEM165-CDG. Here, the researchers wondered whether this suppression also depended on the source of the FBS. To tackle this point, TMEM165 KO HEK293 cells were cultured in two different FBS (FBS 2 or FBS 4) and supplemented with 1 μM MnCl2, 1 mM galactose or 1 μM MnCl2 + 1 mM galactose. Intriguingly, all treatments resulted in fully glycosylated forms of LAMP2 in TMEM165 KO HEK293 cells cultured in FBS 2 (Figure 1A). The result was completely different in cells grown in FBS 4 (Figure 1B). In the latter condition, galactose or Mn2+ supplementation poorly rescued LAMP2 glycosylation (Figure 1B). However, the combination of these two factors rescued the fully glycosylated form of LAMP2 (Figure 1B). This result suggests that, depending on the source of FBS, Mn2+ can enhance the effect of galactose on suppressing LAMP2 glycosylation defects (and vice versa). These results emphasize the critical importance of serum content on glycomic results.
Figure 1. The suppression of LAMP2 glycosylation defect by galactose supplementation depends on the FBS used for cell culture. (Vicogne D, et al., 2020)
Customer Q&As
What is the recommended growth medium? Does it require antibiotic selection?
A: DMEM supplemented with 10% fetal bovine serum.
It is not required to add the selection antibiotics when culturing the KO cells.
How is the knockout cell line validated?
A: The knockout cell product is validated by PCR amplification and Sanger Sequencing to confirm the mutation at the genomic level. Please find the detailed mutation info in the datasheet.
Is the product a single clonal cell or mixed cell pool?
A: Single clonal cell.
Can I confirm gene knockout by RT-qPCR?
A: No. This knockout cell product is generated using the CRISPR/Cas9 system to induce small insertions or deletions (indels) resulting in frameshift mutations. Although these frameshift mutations typically disrupt the coding gene, there is a possibility that the non-functional transcript may still be transcribed. Consequently, this could potentially yield misleading results when analyzed by RT-qPCR.
How can I store the cell product?
A: The cell line should be stored in liquid nitrogen for long-term preservation.
Is it possible to get multiple knockout clones for my GOI?
A: For most cases, we often keep at least 2 clones with different frameshift mutations. Please feel free to contact us to check if there are additional available clones.
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