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pComb3XSS vector

For research use only. Not intended for any clinical use.
Cat.No.
VPT4013
Description
VPT4013 is the modified version of pComb3X. The "SS" refers to the double stuffer, a 1200bp stuffer in the Fab light chain cloning region bounded by SacI and XbaI restriction sites and a 300bp stuffer in Fab heavy chain cloning region bound by XhoI and SpeI restriction sites. Also, the 1600bp double stuffer (both stuffer plus the leader sequence between the Fab light chain and heavy chain cloning regions) can be removed by SfiI digest so that non-Fab genes of interest can also by cloned.
Promoter
LacZ
Resistance
Amp
Selection
Ampicillin
Tag
His6;HA
Vector Length
4973 bp
Vector Type
Phagemid vector
Vector Map

Background

Case Study

Applications

Publications

Q & A

Customer Reviews

The pComb3XSS vector is a highly effective third-generation plasmid designed for phage display on a modified geneIII, which contains a “stuffer” fragment as an integral part of the plasmid. This plasmid is considered highly suitable for the phage display method that presents polypeptides on the surface of phage particles. The pComb3XSS vector includes an Ampicillin antibiotic resistance marker, enabling easy selection in bacterial hosts. In terms of size, the vector is 4992 base pairs in length. It is primarily used for bacterial expression and phage display types of research. The plasmid is characterized as a high copy number vector, an attribute important for the amplification and consequent experimental application. High copy number plasmids amplify the plasmid DNA and produce a large number of proteins, which can be beneficial for cloning and copying genes. The pComb3XSS vector's designated promoter is lacZ. Moreover, the vector features two fusion tags: 6xHis and HA tags. These help to simplify the process of isolating and detecting proteins that have been genetically manipulated with the vector.

Tetanus is a leading cause of death in the developing world and is caused by the tetanus neurotoxin.Recombinant antibodies against tetanus neurotoxin can be used in tetanus treatment.Phage display of antibody fragments from immune human antibody libraries using single-chain constructs that bind variable fragments(scFv)has been one of the most important techniques in antibody engineering.The purpose of this study was to generate a library of variable region single-chain fragments(scFv)and select specific antibodies with high affinity for tetanus toxin.A phagemid library of immunized human single-chain fragment variable(HuscFv)antibodies was displayed on pill of filamentous phage.After three rounds of panning,scFv clones were selected against the tetanus toxin antigen.Selected scFv clones were analyzed for their inhibitory effect on tetanus toxin binding to ganglioside GT1b.The researchers found that six HuscFv clones inhibited toxin binding to ganglioside GT1b.These selected antibodies may be used in the treatment of tetanus.

In this study,the variable regions of the heavy(VH)and light(VL)antibody genes were amplified by PCR.The amplified VH and VL products were electrophoresed and the expected fragment size of 400 bp was observed(Figure 1A).These variable fragments were used in overlap extension PCR reactions to generate scFv fragments.The scFv product(750 bp)was confirmed by agarose gel electrophoresis(Figure 1A).The overlap extension PCR product was cloned into the pComb3Xss vector(purchased from Creative Biogene),and the library was transformed into TG1 E.coli.The total scFv library contained 1×105 clones.

Figure 1. Electrophoresis gel showing the Ig light chain (VL) and heavy chain (VH) domains.Figure 1.Electrophoresis gel showing the Ig light chain(VL)and heavy chain(VH)domains.(Khalili E,et al.,2015)

The pComb3XSS vector is widely used in various fields of molecular biology, including but not limited to: Antibody Library Construction: The pComb3XSS vector is commonly used for the construction of antibody libraries, allowing for the in vitro selection and amplification of specific antibodies. Phage Display: In phage display technology, the pComb3XSS vector provides a platform for the display of peptide or protein libraries on the surface of phage particles. The specific proteins of interest can be selected, enriched and identified through panning against target antigens. Protein Engineering: The pComb3XSS vector can be used as a backbone for protein engineering and directed evolution studies. By introducing genetic mutations into the gene of interest, novel proteins with enhanced or altered functionality can be developed. Gene Expression Studies: The pComb3XSS vector allows for the cloning and expression of target genes, which can provide fundamental insights into gene function and regulation. Drug Discovery: The pCom3XSS vector aids in the discovery and optimisation of therapeutic antibodies or protein drugs. It enables screening and selection of antibodies with desired binding and neutralising activities.
Publications
  1. Khalili E, Lakzaei M, Rasaee M J, et al. Production of recombinant human scFv against tetanus toxin heavy chain by phage display technology[J]. Monoclonal Antibodies in Immunodiagnosis and Immunotherapy, 2015, 34(5): 303-309.
Customer Q&As
What are the improvements to pComb3?

A: Improvements to pComb3 include increased stability and the introduction of an asymmetric SfiI cassette for directional cloning of intact Fabs, scFvs, peptides, and other proteins for phage display.

What are the components of a phagemid?

A: The phagemid contains the filamentous phage intergenic region, including the origins of plus- and minus-strand synthesis and all other cis -acting elements required for the synthesis and packaging of ssDNA into virions.

What are the features and functions of the pComb3XSS vector?

A: The pComb3XSS vector has several key features and functions that make it suitable for library cloning, particularly in the context of antibody engineering. Here are the main features: • Double Stuffer Regions: The vector contains a 1200 bp stuffer in the Fab light chain cloning region, which is flanked by SacI and XbaI restriction sites. It also has a 300 bp stuffer in the Fab heavy chain cloning region, bounded by XhoI and SpeI restriction sites. These stuffers facilitate the cloning process by providing a scaffold for insertion. • Leader Sequence: In addition to the individual stuffers, there is a leader sequence present between the Fab light chain and heavy chain cloning regions. This sequence is important for protein expression and proper folding. • Asymmetric SfiI cassette: The entire 1600 bp double stuffer, which includes both the light and heavy chain stuffers and the leader sequence, can be removed using SfiI digestion. This allows for the subsequent insertion of non-Fab genes of interest, providing versatility in cloning various proteins. • M13 geneIII The M13 geneIII is a component of the M13 bacteriophage. This gene produces the pIII protein, which is found on the surface of the phage. Gene III is commonly utilized in phage display systems to present peptides or proteins on the surface of filamentous phages. This method allows for the identification and selection of peptides with specific binding properties, which is beneficial for applications such as antibody development and protein-protein interaction studies.

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Customer Reviews
An excellent choice

PComb3XSS vector is an excellent choice for phage display libraries. PComb3XSS's ease of use, ability to create diverse libraries, and high phage production significantly streamline the process of protein engineering and selection.

French

10/16/2022

Amazing

The pComb3XSS vector is amazing when it comes to increased fusion protein expression, resulting in better visualisation and screening.

United Kingdom

03/19/2021

Very helpful

It's an effective vector for the selection of high-affinity antibodies. I particularly appreciate that pComb3XSS vector allows for site-specific mutagenesis which is very helpful in my research.

United Kingdom

01/16/2022

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