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pBluescript II KS(+)

For research use only. Not intended for any clinical use.

Cat. No. :   VET1448

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Cat. No. VET1448
Background pBluescript II phagemids (plasmids of bacteriophage origin) are cloning vectors designed to simplify commonly used cloning and sequencing procedures, including construction of nested deletions for DNA sequencing, in vitro generation of RNA transcripts, and site-directed mutagenesis and gene mapping. The pBluescript II phagemid has an extensive polylinker with 21 unique restriction enzyme recognition sites. The polylinker is flanked by T7 and T3 RNA polymerase promoters and can be used to synthesize RNA in vitro. The choice of promoter used to initiate transcription determines which strand of the insert cloned into the polylinker will be transcribed.
Host Cell Escherichia coli
Promoter T7/T3
Resistance Ampicillin
Vector Type Expression Vector
Vector Size 2961 bp
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Case Study 1

Steroid hormones are essential for mammalian survival, playing critical roles in carbohydrate metabolism, stress response, and reproductive function. To investigate mitochondrial cholesterol transport and the molten globule state of key proteins in steroidogenesis, this experimental protocol provides a systematic in vitro and ex vivo workflow, including transfection of non-steroidogenic cells, measurement of steroidogenic activity, and metabolic conversion analysis. By combining recombinant proteins (such as StAR, P450scc, and 3βHSD2) with mitochondrial systems, this approach enables quantitative assessment of cholesterol transport and precursor hormone (pregnenolone/progesterone) production, while also allowing identification of protein molten globule intermediate states in live cells or cell-free systems. This provides a reliable tool for studying protein folding, function, and metabolic regulation.

Figure 1. Key materials used in this protocol include Plasmid Bluescript-KSFigure 1. Key materials used in this protocol include Plasmid Bluescript-KS (VET1448) provided by Creative Biogene. (Bose HS, et al., 2025)

Case Study 2

Determination of a protein molten globule state Determination of a protein molten globule state

Protocol for assessing mitochondrial cholesterol transport and protein molten globule state in steroidogenic and nonsteroidogenic systems

Paper 2025
STAR Protocols | DOI
Background
This STAR Protocols article presents a detailed protocol for studying mitochondrial cholesterol import and protein molten-globule conformations in steroidogenic and nonsteroidogenic cells. It describes cell culture, Lipofectamine transfection with StAR and F2 constructs, radioimmunoassay-based quantitation of pregnenolone/progesterone, and assay of biosynthetic proteins using isolated mitochondria. The protocol also includes methods to detect the inactive dry molten-globule state of P450scc using urea, digitonin, or mitochondrial uncouplers, followed by SDS-PAGE/autoradiography, as well as 14C-cholesterol conversion and GC/MS steroid verification. Troubleshooting and quality-control tips ensure reproducible results.
Key Findings
The protocol establishes a quantitative method to measure mitochondrial cholesterol transport by determining pregnenolone/progesterone synthesis. Overexpression of StAR with the F2 vector (P450scc, ferredoxin reductase, ferredoxin) in nonsteroidogenic COS-1/HEK-293 cells produced 6- to 10-fold higher steroid output relative to controls. For import/folding studies, cell-free 35S-labeled P450scc is incubated with isolated mitochondria; urea, digitonin, or decouplers such as oligomycin and valinomycin trap processing at the 57-kDa intermediate, preventing formation of the active 51-kDa enzyme and thereby producing the inactive dry molten-globule state. Urea-containing media applied to living transfected cells similarly blocks final processing and eliminates steroidogenic activity. The protocol includes RIA standard-curve generation, western-blot expression validation, and use of 22R-hydroxycholesterol as positive control. Metabolic conversion with 14C-cholesterol followed by TLC and GC/MS confirms steroid identity. These steps allow reliable comparison of wild-type vs mutant proteins and assessment of folding states in live cells.
Contribution
Creative Biogene supplied the Plasmid Bluescript-KS (VET1448), which was used as the normalization vector in the transfection assay.

pBluescript II KS(+) is a commonly used cloning vector in molecular biology research. It has various applications, including:

1. Cloning and amplification of DNA sequences: PBluescript II-KS (+) can be used to clone and amplify DNA fragments of interest. It contains the necessary elements, such as an origin of replication and antibiotic resistance genes, which allow for the stable maintenance and amplification of the inserted DNA.

2. Gene expression studies: The vector contains a multiple cloning site (MCS) that enables the insertion of DNA fragments in the correct reading frames for expression studies. Additionally, it provides the necessary control elements, such as promoters and terminators, for gene expression analysis.

3. Construction of recombinant plasmids: PBluescript II-KS (+) can be used as a backbone vector to construct recombinant plasmids for various purposes, such as protein expression, protein purification, or protein-protein interaction studies.

4. DNA sequencing: The vector contains a T7 and T3 promoter flanking the MCS region, allowing for the easy synthesis of RNA probes for DNA sequencing. This enables efficient DNA sequencing of cloned fragments.

5. Mutagenesis studies: PBluescript II-KS (+) can be used for site-directed mutagenesis studies. The vector's MCS region allows for the introduction of specific mutations in the cloned DNA fragment, enabling the study of functional domains or specific amino acid residues.

6. Subcloning and DNA manipulation: The vector has a small size (2961 bp) and its MCS region provides unique restriction enzyme recognition sites, allowing for easy subcloning and manipulation of DNA fragments.

Customer Q&As
What is pBluescript II KS(+)?

A: PBluescript II-KS (+) is the plasmids of Escherichia coli. It is a cloned carrier, which is derived from phage.

What are the applications of PBluescript II-KS (+)?

A: PBluescript II-KS (+) is commonly used in cloning and sequencing, including DNA sequencing, nested deletion, RNA transcription, site-directed mutagenesis, and gene mapping in vitro.

How many unique restriction endonuclease loci does PBluescript II-KS (+) contain?

A: PBluescript II-KS (+) contains 21 unique restriction endonuclease loci.

What is the 5' sequencing primer for pBluescript II KS(+) vector?

A: The 5' sequencing primer for pBluescript II KS(+) vector is T7 (TAATACGACTCACTATAGGG).

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Customer Reviews
Wide scope of application

The pBluescript II KS(+) vector is highly versatile and can accommodate a wide range of DNA fragment sizes, making it suitable for various molecular biology applications.

United Kingdom

Selection markers

The pBluescript II KS(+) vector contains the ampicillin resistance gene (ampR), which allows for the selection of transformed bacterial cells.

French

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