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microDOWN™ miRNA Antagomir

Service DetailsProtocolCase StudyPublication

Service Details

Antagomir is chemically-modified single-strand miRNA inhibitor functioning by blocking miRNA regulation of target gene expression efficiently. They are synthesized to reduce the ability of endogenous miRNAs to silence target mRNA transcripts. They can down-regulate the corresponding endogenous miRNAs by either local or systemic injection into the animals.

Creative Biogene's microDOWN™ miRNA antagomir is single-strand miRNA inhibitor carrying the chemically modifications functioning by blocking miRNA regulation of target gene expression efficiently. The strand of the antagomir has 2 phosphorothioates at the 5' end, 4 phosphorothioates, 1 cholesterol group at the 3' end, and full-length nucleotide 2'-methoxy modification. Stability of microDOWN™ miRNA antagomir appears to be significantly higher than miRNA inhibitors. It exhibits enhanced cellular uptake, stability and regulatory activity and is recommended for miRNA functional studies in vitro and in vivo.

microDOWN™ miRNA Antagomir Figure 1. Mechanism of microDOWN™ miRNA antagomir.

microDOWN™ miRNA AntagomirFigure 2. qRT-PCR and western blot assays show the mRNA (A) and protein (B) expressions of TOB1 after transfection with antagomir-NC and antagomir-25.

Our microDOWN™ miRNA antagomir has unparalleled advantages

  1. Cover all human, mouse, rat miRNAs
  2. Optimized modifications for stable utility and easy transfection
  3. Long-term (up to 6 weeks) inhibition of the corresponding endogenous miRNAs
  4. No need of virus or vector for delivering
  5. Ready for in vivo and in vitro studies
  6. Various scales and grades for your application
  7. microDOWN™ antagomir negative control is available

Protocol

Resuspension Protocol

  1. Briefly centrifuge tubes containing miRNA antagomir to ensure that the miRNA pellet is located at the bottom of the tube.
  2. Dissolve miRNA antagomir to a convenient stock concentration using the recommended volume of DEPC H2O (or RNase-free water). For example: Dissolve 1 OD miRNA antagomir to 20 µM using 250 µl DEPC H2O (or RNase-free water).
  3. Pipette the solution up and down 3-5 times (or vortex briefly).
  4. Briefly centrifuge tubes containing miRNA antagomir to ensure that the solution is collected at the bottom of the tube.
  5. Aliquot the miRNA antagomir into small volumes and store at -20°C. miRNA antagomir is stable (for 6 months under the specified storage condition). For best results, use in 3 months and limit freeze-thaw events for each tube no more than five times.

Cell Assay

Recommended amounts of microDOWN™ antagomir for your cell assay.

miRNACellAntagomirReferences
miR-122Huh-7 WT, CNS350 nMShan Y, et al. Gastroenterology. 2007
miR-206HeLa, MDA-231, MCF-720-50 nMBrian D, et al., Mol Ther. 2007
miR-27a, miR-451A2780100 nMZhu H, et al. Biochem Pharmacol. 2008
miR-126, miR-126LNCaP10~30 nMAlla Musiyenko, et al. J Mol Med. 2008
miR-184, miR-205HeLa, HEKs1 μMJia Yu, et al. PNAS. 2008
miR-221, miR-222Me665/150~250 nMFederica et al. Cancer Res. 2008
miR-196bbone marrow cells100 nMRelja Popovic, et al. Blood. 2009
miR-221, miR-222hepatocellular carcinoma-derived100 μMPascal Pineau, et al. PNAS. 2010
miR-214MC3T3-E1, hFOB200 μMXiaogang Wang, et al. Nat Med. 2012
miR-214MC3T3-E1200 nMWang X, et al. Nat Med. 2013


In Vivo Delivery

miRNAAnimalDeliveryDosesVolumeInjection TimesDetectionReferences
miR-122
miR-192
6-week-old micetail-vein injections80 mg per kg body weight0.2 ml per injection1 to 3 consecutive days24 h after the last injectionKrützfeldt J, et al. Nature. 2005
miR-166-week-old miceIntracerebral injection~800 ng per mouse0.2 ml per injectiona single injection72 h after injectionJan Krützfeldt, et al., Nucleic Acids Research. 2007
miR-1338-week-old miceminipump implantation80 mg per kg body weightN/Aa single infusion1 month after minipump implantationAlessandra Care, et al. Nature Medicine. 2007
miR-17-5p6-week-old nude miceintratumorally injection0.2 mg per mouse0.1 mlthree times per week for two weeks2 weeks after the first injectionLaura Fontana, et al. PLoS ONE. 2008
miR- 2110~12 weeks old micejugular vein catheter80 mg per kg body weightN/Ainjected daily for three days3 weeks after the first injectionThomas Thum, et al. Nature. 2008
miR-221
miR-222
6-week-old miceintratumorally injection1 ug of each antagomir40 μlat day 0, 5 and 9, for a injections per tumorN/ANeri Mercatelli, et al. PLoS ONE. 2008
miR-145ratminipump implantationtotally 960 pmol each rat48 μlN/AN/AAshuthosh Dharap, et al. J. Cereb. Blood Flow Metab. 2009
miR-28616-week-old female micetail vein injection80 mg/kg body weight0.2 ml per injectiondays 1 to 3 for 3 consecutive weeks4 days, 3 weeks, and 6 weeks after the last injectionLi H, Xie H, et al. J Clin Invest. 2009
miR-92miceintravenous injection8 mg per kg of body weight0.2 ml per injectionat days 0, 2, 4, 7, 9 of the left coronary artery14 daysBonauer A, et al. Science. 2009
miR-151-5pnude micetransplantion2x106 cells transfected by antagomirN/A5 weeks after injectionJie Ding, et al. Nature cell biology. 2010
miR-125b6~8 weeks old nude micesubcutaneously injection2x105 cells transfected by antagomirN/A4 weeks after injectionLinHui Liang, et al. Hepatology. 2010
miR-3354-week-old nude miceIntratumorally injection4 mg/ml50 μlevery two days for 2 weeks2 weeks after the first injectionMinfeng Shu, et al. Molecular Cancer. 2011

Case Study

Case Study 1

Myotonic dystrophy type 1 (DM1) is a rare neuromuscular disease caused by expansion of unstable CTG repeats in the noncoding region of the DMPK gene. CUG expansion in mutant DMPK transcripts sequesters MBNL1 protein into ribonuclear foci. Antisense oligonucleotides targeting miR-218 were previously shown to enhance MBNL1 expression and rescue the phenotype in disease models. Here, researchers provide preclinical characterization of the antagomiR-218 molecule using HSALR mouse models and patient-derived myotubes. In HSALR, antagomiR-218 reached 40-60 pM 2 weeks after injection, rescued molecular and functional phenotypes in a dose- and time-dependent manner, and showed a favorable toxicity profile after a single subcutaneous injection. Furthermore, miR-218 is significantly overexpressed in DM1 muscle samples and disease models and thus may contribute to the disease phenotype through MBNL1- and 2-independent pathways. These results highlight the therapeutic potential of miR-218 blocking oligonucleotides as potential treatments for DM1.

Figure 3. Duration of antagomiR-218 therapeutic effects upon single subcutaneous injection. (AntagomiR-218 and scramble control were synthesized by Creative Biogene.)Figure 3. Duration of antagomiR-218 therapeutic effects upon single subcutaneous injection. (AntagomiR-218 and scramble control were synthesized by Creative Biogene.) (Cerro-Herreros E, et al., 2021)

Case Study 2

Defects in the epithelial tight junction (TJ) barrier contribute to the development of disease-associated intestinal inflammation. Interleukin 1 beta (IL1B) increases intestinal permeability in mice. Studies here show that IL1B mRNA and MIR200C-3p levels are elevated in intestinal tissue from ulcerative colitis patients and colitis mice, thereby reducing the expression of occludin by enterocytes and increasing TJ permeability. antagomiR-200C prevents the reduction of occludin in intestinal epithelial cells and intestinal tissue in mice with colitis, thereby maintaining the TJ barrier.

Figure 4. Effects of mouse DSS-induced colitis on the cooperation between IL-1β, miR-200c3p, and mouse intestinal permeability.Figure 4. Effects of mouse DSS-induced colitis on the cooperation between IL-1β, miR-200c3p, and mouse intestinal permeability. Effects of oral administration of DSS for 7 days on IL-1β mRNA expression (A), miR-200c-3p expression (B), and occludin mRNA expression (C). The colonic perfusion of DSS mice to analyze the effect of antagomiR-200c on DSS-induced increase in IL-1β mRNA expression (D), increase in miR-200c-3p expression (E), decrease in occludin mRNA expression (F) and increase in dextran 10kD flux (G). Effect of antagomiR-200c gavage on body weight of DSS mice (H), histological observation of the effect of antagomiR-200c on mouse colon, (I). (AntagomiR-200c and non-specific antagomiR were designed by Creative biogene) (Rawat M, et al., 2020)

Case Study 3

Myotonic dystrophy type 1 (DM1) is a chronic, debilitating rare genetic disorder that originates from the expansion of noncoding CTG repeats in the dystrophia myotonica protein kinase (DMPK) gene. This expansion is pathogenic when DMPK transcripts contain 50 or more repeats due to sequestration in the myoblading-like (MBNL) protein family. Here, researchers demonstrate the therapeutic effects of antagomiR-23b administered as a treatment in human skeletal actin long repeat (HSALR) mice over time. Subcutaneous administration of antagomiR-23b upregulates MBNL1 protein expression and rescues splicing alterations, grip strength, and myotonia in a dose-dependent manner with long-lasting effects.

Figure 1. Comparative Study between Subcutaneous and Intravenous Delivery of AntagomiRs in Mice.Figure 5. Comparative Study between Subcutaneous and Intravenous Delivery of AntagomiRs in Mice. (AntagomiR against miR-23b and the SC control was purchased from Creative Biogene.) (Cerro-Herreros E, et al., 2020)

Publication

  1. Greene M A, Powell R, Bruce T, et al. miRNA transcriptome and myofiber characteristics of lamb skeletal muscle during hypertrophic growth1[J]. Frontiers in Genetics, 2022, 13: 988756.
  2. Fernández-Garibay X, Ortega M A, Cerro-Herreros E, et al. Bioengineered in vitro 3D model of myotonic dystrophy type 1 human skeletal muscle[J]. Biofabrication, 2021, 13(3): 035035.
  3. Cerro-Herreros E, González-Martínez I, Moreno N, et al. Preclinical characterization of antagomiR-218 as a potential treatment for myotonic dystrophy[J]. Molecular Therapy-Nucleic Acids, 2021, 26: 174-191.
  4. Rawat M, Nighot M, Al-Sadi R, et al. IL1B increases intestinal tight junction permeability by up-regulation of MIR200C-3p, which degrades occludin mRNA[J]. Gastroenterology, 2020, 159(4): 1375-1389.
  5. Gomez I, Ward B, Souilhol C, et al. Neutrophil microvesicles drive atherosclerosis by delivering miR-155 to atheroprone endothelium[J]. Nature communications, 2020, 11(1): 214.
  6. Cerro-Herreros E, González-Martínez I, Moreno-Cervera N, et al. Therapeutic potential of AntagomiR-23b for treating myotonic dystrophy[J]. Molecular Therapy-Nucleic Acids, 2020, 21: 837-849.
  7. Ponnusamy V, Yip P K. The role of microRNAs in newborn brain development and hypoxic ischaemic encephalopathy[J]. Neuropharmacology, 2019, 149: 55-65.
  8. Wang Z, Wang Z, Ma H, et al. Attenuation of the hypoxia-induced miR-34a protects cardiomyocytes through maintenance of glucose metabolism[J]. Biochemical and Biophysical Research Communications, 2018, 498(3): 375-381.
  9. Zhang Y, Meng W, Yue P, et al., RETRACTED ARTICLE: M2 macrophage-derived extracellular vesicles promote gastric cancer progression via a microRNA-130b-3p/MLL3/GRHL2 signaling cascade[J]. Journal of Experimental & Clinical Cancer Research, 2020, 39(1): 1-20.
* For research use only. Not intended for any clinical use.
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